A practitioner's guide to the best EHR systems for integrative and functional medicine in 2026, with pricing, lab integrations, and which model fits your practice.

There are over 500 EHR systems on the market.
But most of them were built for conventional fifteen-minute visits or large hospital systems, not for how integrative and functional medicine practitioners actually work.
As an integrative practitioner, you need things most platforms weren't designed for: specialty lab integrations, supplement dispensing, customizable intake forms, and charting that accommodates sixty-to-ninety-minute visits.
The right system supports your workflow. The wrong one forces you to reshape how you deliver care.
In this guide, we'll break down the 19 most relevant EHR and EMR systems for integrative and functional medicine practitioners.

The category leader for clinically deep functional and integrative medicine, used by 5,000+ practitioners. Purpose-built around the long initial visits, longitudinal lab tracking, and protocol-heavy care plans that functional medicine actually requires. Formerly MDHQ. Cerbo merged with OptiMantra in December 2025 under a single parent company; both products continue to operate independently with publicly stated investment in AI, CRM, and payments.
$269/month per prescribing provider, $244/month per non-prescribing provider, $121/month per supporting/alternate provider, $60/month per additional staff member. Setup fee around $1,195 (sometimes waived). No contracts. Demo only, no free trial. Premium pricing for the deepest feature set.
Functional and integrative MDs and NDs, DPC and concierge practices, IV/BHRT and hormone clinics, IFMCP-credentialed providers, and mid-sized practices that want clinical depth and lab/supplement/protocol integration in one place. Not a fit for heavy insurance-billing practices, mental-health-only practices, or solo coaches looking for a lighter tool.
The most flexible multi-modality EHR for integrative wellness clinics. Naturopaths, acupuncturists, chiropractors, NPs, dietitians, aestheticians, and FM providers can all operate under one roof. 96% user satisfaction on SelectHub across 171 reviews and one of the few EHRs with a native AI scribe via DeepCura. Now part of the merged Cerbo/OptiMantra company.
$99/month for the first practitioner, $49/month for each additional practitioner, $25/month per clinical staff seat. DeepCura AI scribe priced separately. Monthly billing, no contracts.
Multi-modality integrative clinics (acupuncture + naturopathic + chiro + massage), med-spas, NP-led FM practices, behavioral health, membership and direct-pay models, and growing teams. Not ideal for enterprise systems, high-volume insurance billing as primary revenue, or practices that need pre-built FM-specific protocols (Cerbo wins there).
The strongest virtual-first platform for nutrition-focused and FM practices. 27,000+ clinicians caring for 10M+ patients across 25+ specialties. One of very few in this category that holds ONC certification, HITRUST R2, HIPAA, and SOC 2 Type 2 simultaneously, which is rare at this price point. Native Rupa Health and Fullscript integrations make it a real functional medicine contender, especially for digital-first practices.
Core $19.99/month (10 active clients). Essentials $49.99/month (250 clients). Plus $129.99/month (unlimited, most popular). Group $149.99/month. AI Scribe from $35/month. 14-day free trial, 10% annual discount.
Virtual-first dietitians, nutritionists, health coaches, FM/integrative solo and group practices, digital health startups needing API access, and multi-state telehealth networks. Not for prescribing providers (no native eRx), brick-and-mortar primary care, or very simple solo coaches who'd find it overkill.
The most popular platform among functional medicine practitioners doing lifestyle and supplement-based care. 50,000+ practitioners across 40+ countries. Strong fit when the work has significant coaching, nutrition, and behavior-change components on top of clinical care.
Sprout Free (3 active clients). Starter $35/month. Professional $69/month (300 clients, programs). Plus $99/month (unlimited, branding, dedicated fax). Team $155/month (2 practitioners, then $50/month for each additional). Add-ons for AI charting, eRx, SMS, and storage.
Solo nutritionists and dietitians, health coaches, FM practitioners with a strong lifestyle and coaching focus, virtual-first practices, group programs, and international practices needing PIPEDA/GDPR compliance. Not for IV therapy or BHRT-heavy clinics, insurance-heavy practices, or multi-provider clinics needing rigorous medical-grade documentation.
A 10+ year established player widely adopted by integrative, naturopathic, and functional medicine practices. Uniquely, it's a true ONC-ATCB-certified, Meaningful Use Stage 3 EHR at FM-friendly pricing. The free tier (up to 50 encounters/month) makes it the most accessible entry point for new practices.
Free plan (≤50 encounters/month, 1 provider, 5 users). Encounter Plan at $1/encounter. Provider Plans around $200/provider/month and $350/provider/month with bundled telehealth and SMS. No setup fees, no contracts.
Solo practitioners and new practices on tight budgets, multi-specialty groups looking for value, and clinicians comfortable with self-customization. Not ideal for practices that need responsive support, deep specialty lab integrations out of the box, or large enterprise health systems.
Started as the most customizable intake form platform in healthcare and grew into a full EHR through PracticeQ. Bootstrapped, founder-owned, and one of the few non-Healthie EHRs with a native Rupa Health integration. Heavily favored by chiropractors, integrative MDs, NDs, and FM practitioners specifically because of that Rupa connection.
IntakeQ (forms only) $49.90/month standard, $29.90/month low-volume. PracticeQ (full EHR) $54.90/month standard, $39.90/month Starter. eRx adds $65/month. Free trial, month-to-month. The best value in this space when you factor in what's included.
Cost-conscious integrative practices that want Rupa Health labs natively, chiropractors, cash-pay solo and small group practices, practices that prioritize custom forms, and practitioners who'd rather not work with PE-owned platforms. Not for large group practices needing ONC interoperability or those wanting an AI scribe out of the box.
The only EMR endorsed by A4M (American Academy of Anti-Aging Medicine) and the first EMR designed specifically for integrative medicine. Standout feature: 30+ pre-built IV therapy protocols, making it the strongest option for IV-heavy clinics.
Not publicly listed. Estimated $199-$449/month per provider based on third-party sources. Custom quote required, demo only. Request a detailed quote and call current users before committing.
A4M-aligned anti-aging and longevity clinics, IV therapy-heavy practices, BHRT and hormone-pellet clinics, and integrative practices that order heavily through Evexia. Not for budget-sensitive solo practitioners, MIPS-reporting practices, or anyone who needs pricing transparency.
A clinical-first EHR for independent primary care, serving 46,000+ clinicians. Best in KLAS Small Practice Ambulatory EMR/PM two consecutive years. Not integrative-specific, but its clean three-panel UI, included AI scribe, native Rupa Health integration, and DPC-ready membership billing make it the strongest hybrid pick for primary-care-leaning FM practices.
Direct Care plan $275/provider/month annual ($349 monthly). Insurance plan $333-$399/provider/month. Enterprise/custom for large groups. The included AI scribe meaningfully offsets the premium pricing. 30-day free trial.
Primary care MDs/DOs/NPs (1-10 providers) adding integrative services, DPC and concierge practices, hybrid primary care + integrative clinics, and FM practices that want a polished primary-care backbone with Rupa for labs. Not for exclusively integrative clinics needing IFM workflows or supplement dispensing out of the box.
The polished UX leader for allied health and wellness. 200,000+ practitioners at 50,000+ clinics across Canada, US, UK, and Australia. Originally built for PTs, chiropractors, massage therapists, and counselors, but increasingly used by multidisciplinary integrative clinics that need strong scheduling and a beautiful client experience. Bootstrapped until a TCV-led ~$500M secondary financing in 2025 at a $1.8B valuation.
Balance ~$54/month USD (1 practitioner, 20 appointments/month). Practice ~$79/month base. Thrive top tier with memberships and packages. AI Scribe Unlimited $15/practitioner/month. Insurance Billing $20/month + $5/practitioner.
Multidisciplinary clinics (chiro + massage + naturopath + nutrition), in-person + telehealth hybrid practices, allied health, and Canadian + cross-border practices. Not for true FM practices that need Rupa/Fullscript natively, prescribing providers needing eRx, or large practices needing ONC interoperability.
Formerly Vibrant Practice, Ultralight is an AI-native EHR purpose-built for functional, integrative, longevity, and concierge medicine. The differentiator: the AI scribe and clinical co-pilot are built into the core workflow rather than bolted onto a legacy system. Customers include Bryan Johnson's Blueprint, D5 Health, Kuros Medical, and Living Proof Medicine.
$525/month per prescribing clinician, $300/month per non-prescribing clinician, and $50/month for unlimited admin seats on the Core plan. $995 one-time implementation fee plus custom-priced data migration. A Launch tier offers onramp pricing for startup practices under 50 patients, and an Enterprise tier is available for multi-site clinics or practices over 1,000 patients. Worth comparing against your current stack: if you're already paying $100 to $200/month for an AI scribe on top of a legacy EHR, the all-in cost gap narrows.
Functional, integrative, longevity, and concierge practices that work with significant patient data (trended labs, advanced diagnostics, wearables) and want AI to do the synthesis work. Not a fit for insurance-driven practices, high-volume primary care, or budget-conscious solo practitioners who don't need the AI co-pilot.
Of the conventional mid-market EHRs, DrChrono is the only one with a direct, productized Fullscript integration since February 2021. Now that Fullscript has acquired Rupa Health, that single integration unlocks 35+ specialty labs (Genova, DUTCH, Great Plains, Doctor's Data, Vibrant, Boston Heart). iPad-native, used by ~13,000 providers across 4,600+ practices. Named #1 Mobile EHR for 11 consecutive years.
Starting at ~$299/provider/month per the public site. Five tiers from Essentials to Elite. Third-party sources cite $199-$250/provider/month entry, scaling to $300-$600+ for advanced bundles. No setup fees.
Solo and small integrative/functional practices already using Fullscript, iPad-mobile providers, concierge and house-call clinicians, and multi-disciplinary chiro + NP practices. Not for practices that need rock-solid uptime and white-glove support, large multi-location enterprises, or those wanting prebuilt FM templates out of the box.
The 2021 merger of Kareo (EHR + billing) and PatientPop (patient acquisition/marketing), creating an all-in-one platform for independent practices. For integrative practitioners who want a mainstream, ONC-certified EHR with strong insurance billing plus a patient-acquisition layer, Tebra is the most reasonable mainstream pick. Pair it with Rupa and Fullscript for FM-specific workflows.
Typically $99-$399/provider/month based on modules. Custom quote required. Two primary bundles: Practice Essentials and Practice Automation. Setup ~$500. Volume discounts for multi-provider groups.
Small-to-midsize integrative practices that bill insurance meaningfully, solo practitioners who want built-in marketing and reputation tools, MIPS-reporting practices, and clinics willing to pair with Rupa and Fullscript separately. Not for pure cash-pay DPC/concierge clinics, specialty FM practices needing native lab/dispensary integrations, or clinics with no prescribing provider.
A 5x Best in KLAS 2026 winner and one of the most comprehensive cloud-based EHRs available. Mature, integrated EHR + RCM + patient engagement platform leveraging 150,000+ provider network intelligence and a 98.4% clean claim submission rate. Has 277K+ direct clinical integrations and a native Fullscript integration via its marketplace, which is uncommon among mainstream EHRs.
Percentage-of-collections model, typically 4-7% of monthly collections. Third-party reports cite ~$140-$199/provider/month equivalent at smaller volumes, with larger practices reporting $500+/provider/month as volume grows. The math only makes sense at scale with substantial billing volume.
Larger integrative clinics (5+ providers) with heavy insurance billing, multi-specialty groups, FM practices wanting MIPS-grade reporting, and practices prioritizing a mature AI tooling stack. Not for solo practitioners, cash-pay/DPC models, tiny practices, or FM clinics where cash and membership revenue dominates.
A cloud-based, ONC-ATCB-certified all-in-one platform for small-to-midsize practices. 86% user satisfaction across 42 SelectHub reviews, which is higher than most mainstream EHRs. Widely praised for customer service, ease of use, and machine-learning-powered charting that learns provider-specific treatment preferences over time. A pragmatic choice for practitioners who want a conventional EHR at moderate price with strong support, and who are willing to bolt on Rupa and Fullscript separately.
EHR Only ~$498/provider/month. PM Only ~$400/provider/month. Full System ~$589/provider/month. Special pricing for part-time providers. Custom quotes available, monthly subscription, no long-term contract required.
Small-to-midsize integrative and functional practices (1-10 providers) billing insurance, practices that prioritize responsive customer support over cutting-edge FM features, and Mac-native practices. Not for large enterprise health systems, cash-pay-only practices, or those needing native specialty lab/dispensary integrations.
A publicly traded (Nasdaq: CCLD) cloud-based platform offering EHR (Charts), practice management, Breeze patient engagement, and RCM services. Purpose-built for mid-to-large multi-specialty practices that handle complex billing and high patient volumes. The 2025 cirrusAI rollout (AI for appeals, notes, chat, and guidance) modernized the platform meaningfully.
$349-$649/provider/month depending on modules. EHR-only plans start ~$349/month. Full EHR + PM + Breeze + RCM runs higher. Custom quote required.
Mid-to-large multi-specialty integrative groups (3+ providers) that need enterprise-grade billing, practices with heavy insurance volume and complex RCM needs, and groups prioritizing patient engagement tools (Breeze). Not for solo or small practices, cash-pay-only practices, or practices that prioritize customer support quality. Reference checks before signing are strongly recommended given recent review trends.
Serves 200,000+ "health and wellness professionals" with the most polished consumer-grade UX in the category. Primarily a behavioral health platform, but widely adopted by solo dietitians, health coaches, and cash-pay wellness practitioners who prioritize ease of use over deep FM tooling. Acquired by Vista Equity Partners + General Atlantic for $4 billion in January 2024.
Starter $49/month (basic). Essential $79/month (telehealth, insurance billing). Plus $99/month (group telehealth, team add-on). AI Note Taker $35/month. eRx $49/month + $89 setup. Group practice clinician fees $69-$74/month. 30-day free trial.
Solo and small group mental health, behavioral health, therapists, insurance-heavy wellness practices, and simple cash-pay nutrition counselors who want a polished UX. Not for functional or integrative medicine that needs Rupa/Fullscript/labs, complex DPC/membership models, or practitioners with concerns about PE ownership and data ToS.
The most affordable, nutrition-centric option for practitioners whose primary work is nutritional therapy. The meal planning engine (60-second AI-generated meal plans, 360,000+ recipe database, 70,000+ food items, seven food databases including USDA, AUSNUT, and UK) is best-in-class for nutrition-focused practices. Useful for FM adjacents (autoimmune, GI, hormone protocols) where dietary precision matters more than complex EHR features.
Starter Free (3 clients). Basic 5 $24.99/month. Basic $34.99/month. Popular $49.99/month. Professional $74.99/month. Business custom (multi-user). 14-day risk-free trial. Approximately 2 months free on annual plans.
Solo and small-team registered dietitians, nutritionists, nutritional therapists, and wellness coaches focused on nutrition coaching, meal planning, and behavior change. International practitioners. New grads and students. Not for FM MDs, NDs, or DCs needing labs and supplements, insurance-billing practices, or practices needing eRx and ONC interoperability.
UK-headquartered, serves 3,500+ practices and 23,000+ users across UK, EU, and increasingly the US. Explicitly markets to functional medicine, wellness, medspa, aesthetics, dermatology, and multi-specialty clinics. Strong fit for cash-pay membership practices and hybrid wellness/aesthetic-FM clinics.
Per-user, full-platform on every tier with no feature gating. Starter & Solo (~$62/user/month). Team (2-3 users), Medium (4-5), Group (6-15), Enterprise (16+). Plus tier ~$99/user/month. Annual billing saves up to 20%.
Multi-specialty wellness, aesthetic, and integrative clinics, UK and EU FM practices, US medspas with FM/IV/HRT lines, and cash-pay membership practices. Not for US insurance-heavy primary care, FM clinics that require Fullscript/specialty-lab integrations as core workflow, or providers needing EPCS for controlled substances.
The strongest cloud EMR for Canadian integrative, naturopathic, and multi-disciplinary practices. Originally InputHealth (acquired by TELUS in 2019), now used by 40,000+ Canadian clinicians. Included here for Canadian readers. US practitioners should look elsewhere.
Quote-only, dynamic per-user/per-usage monthly billing. One-time data migration and onboarding fees. Connect Pro app at $35/provider/month.
Canadian multi-disciplinary clinics, Ontario Health Teams, allied-health collaboratives, and Canadian integrative/naturopathic practices needing provincial billing. Not for US functional medicine practices.
Your practice model should drive the decision:
Start with what your financial model supports and what your workflow requires. You can always migrate later.
Lace Health is a practice-building partner for integrative and functional medicine practitioners. We help MDs, DOs, NPs, and PAs navigate the business side of launching and growing a practice, things like credentialing, billing, legal structure, financial modeling, marketing, and technology decisions like EHR selection.
Our BootCamp is a 10-week, live, cohort-based program where practitioners build a complete business plan and financial model with guidance from Rocky Crocker, MD, plus subject matter experts across billing, compliance, legal, and marketing.
One full session is dedicated to EHR selection, and every participant gets a 1:1 consultation to build a financial model that accounts for technology costs alongside the rest of their practice infrastructure. Over sixty practitioners have come through the program so far, with a 100% completion rate and recommendation scores averaging 9-10 out of 10.
For practitioners ready to launch, Lace Launch handles credentialing, billing, legal templates, and operational buildout, including EHR access at discounted rates. We're also building a collaborative care and outcomes measurement platform that integrates with athenaHealth and Elation, so the clinical data you capture feeds directly into payer advocacy for better reimbursement rates.
If you're exploring what it takes to build or transition an integrative practice, BootCamp is a great place to start. If you're ready to launch, you can apply here.
Takes 2-3 minutes - Limited Availability